BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018C09LP1|AL427292
(1004 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1360 994 0.0
3x_Contig1584 671 0.0
>3x_Contig1360
Length = 8285
Score = 994 bits (499), Expect = 0.0
Identities = 543/559 (97%)
Strand = Plus / Minus
Query: 1 gatccgtagatatgggaccgcaagttaagatgactgtaaatacgttccacgatgtcctct 60
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 559 gatccgtagatatgggaccgcaagtaaagatgactgtgaatacgttccacgatgtcctct 500
Query: 61 tgcaacaattatctagagcaaatacagaagcagaggatgtggacaatcctgaagatacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tgcaacaattatctagagcaaatacagaagcagaggatgtggacaatcctgaagatacaa 440
Query: 121 ccacggctccatctgatgaagcacttcgagatgaagaccacgatactatccctgatacgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ccacggctccatctgatgaagcacttcgagatgaagaccacgatactatccctgatacgc 380
Query: 181 ccaccgatttcatccatccgaatgacgacgcgatgagacaagaaatcatgcaacaacagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ccaccgatttcatccatccgaatgacgacgcgatgagacaagaaatcatgcaacaacagc 320
Query: 241 agagagtgagamaacaacaaatcgaagaagagctgaagcaagaatctgcgttatatacgg 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 agagagtgagacaacaacaaatcgaagaagagctgaagcaagaatctgcgttatatacgg 260
Query: 301 aagaagtacggaccattgccaacggtgaaattaagagtggatggaaatcagatttttctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aagaagtacggaccattgccaacggtgaaattaagagtggatggaaatcagatttttctg 200
Query: 361 ataagggaaccatcgagctagtgacagacattgactgtktgagactcaattctggtgtta 420
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 199 ataagggaaccatcgagctagtgacagacattgactgtatgagactcaattctggtgtta 140
Query: 421 ccaatcctatcagccatgcatccacacggaatccatgcgtattacctaatcaagataacg 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 139 ccaatcctatcagccatgcatccacacggaatccatgcgtattacctaatcaagataaag 80
Query: 481 ttaacgtttcctgtgacatggaggataccaacctcggagtatacgtgagcyatttactat 540
||||||||| ||||| ||||||||||| ||||||||| ||| | ||| |||||||||
Sbjct: 79 ttaacgtttaatgtgaaatggaggatacaaacctcggattattttttagctatttactat 20
Query: 541 tcgttgaggtcatcgttgc 559
| |||||||||||||||||
Sbjct: 19 tagttgaggtcatcgttgc 1
>3x_Contig1584
Length = 9710
Score = 671 bits (337), Expect = 0.0
Identities = 402/413 (97%), Gaps = 9/413 (2%)
Strand = Plus / Minus
Query: 575 aaacgttaatgggggtaatcgtagcagaacgggctctacagtttccgatacatcgaagac 634
|||||||||||||| ||||||||||||||||| |||||||||| |||||||||||| |||
Sbjct: 9664 aaacgttaatgggg-taatcgtagcagaacgg-ctctacagtt-ccgatacatcga-gac 9609
Query: 635 cgcttccaaaccgaaaaacaacgctgaccagaggttagcagagttatcaccaatcttcgc 694
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9608 -gcttccaaaccgaaaaacaacgctgaccagaggttagcagagttatcaccaatcttcgc 9550
Query: 695 tgatagagaaaacaaaccacaacccgtgatagacaaccaaccgggtaacaacgttggccc 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9549 tgatagagaaaacaaaccacaacccgtgatagacaaccaaccgggtaacaacgttggccc 9490
Query: 755 aaaaatcgtcggagtaccaaccggtgctgcgcgtgttctacggatgcagttcagagtmat 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 9489 aaaaatcgtcggagtaccaaccggtgctgcgcgtgttctacggatgcagttcagagtcat 9430
Query: 815 aatgacagaacggtcgggattgggggatctcgtgggamgacgaa-tcccacccggcgtac 873
||||||||||||||||||||| ||||||||||||||| |||||| ||||| |||||||||
Sbjct: 9429 aatgacagaacggtcgggatt-ggggatctcgtgggacgacgaagtccca-ccggcgtac 9372
Query: 874 caggacatcagaatgttaacccctcctaggtatcaagacgtctccactacactactgcac 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9371 caggacatcagaatgttaacccctcctaggtatcaagacgtctccactacactactgcac 9312
Query: 934 agcaccttaagctcacctacgataacgcctccaggggaat-ctcattattcac 985
|||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 9311 agcaccttaagctcacctacgataacgcctccaggggaatcctcattattcac 9259
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5122
Number of Sequences: 1807
Number of extensions: 5122
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 2
length of query: 1004
length of database: 10,358,551
effective HSP length: 16
effective length of query: 988
effective length of database: 10,329,639
effective search space: 10205683332
effective search space used: 10205683332
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)